Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LtbrP50284 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.96□□□□□ -0.97
LtbrP50284 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LtbrP50284 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LtbrP50284 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC8.96□□□□□ -0.97
LtbrP50284 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LtbrP50284 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
LtbrP50284 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.96□□□□□ -0.97
LtbrP50284 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LtbrP50284 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC8.96□□□□□ -0.97
LtbrP50284 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LtbrP50284 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
LtbrP50284 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
LtbrP50284 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC8.96□□□□□ -0.98
LtbrP50284 Gm15988-201ENSMUST00000118677 367 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm15007-201ENSMUST00000119982 710 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm12807-201ENSMUST00000121546 962 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm13409-201ENSMUST00000122072 546 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC8.96□□□□□ -0.98
LtbrP50284 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 Gm26173-201ENSMUST00000158416 136 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC8.96□□□□□ -0.98
LtbrP50284 Gm22408-201ENSMUST00000174925 65 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm5698-201ENSMUST00000178317 724 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm27373-201ENSMUST00000184017 184 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm28016-201ENSMUST00000184594 196 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm27178-201ENSMUST00000184962 340 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm28117-201ENSMUST00000188472 371 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Gm28266-201ENSMUST00000191410 439 ntBASIC8.96□□□□□ -0.98
LtbrP50284 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Gm6522-201ENSMUST00000197160 1203 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm43542-201ENSMUST00000199505 379 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm3189-201ENSMUST00000205595 832 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.96□□□□□ -0.98
LtbrP50284 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 AC144783.1-201ENSMUST00000219103 960 ntBASIC8.96□□□□□ -0.98
LtbrP50284 AC104832.1-201ENSMUST00000222938 550 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
LtbrP50284 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
LtbrP50284 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
LtbrP50284 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.98
LtbrP50284 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.96□□□□□ -0.98
LtbrP50284 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.95□□□□□ -0.98
LtbrP50284 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LtbrP50284 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm43523-201ENSMUST00000197397 2878 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
LtbrP50284 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LtbrP50284 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LtbrP50284 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LtbrP50284 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LtbrP50284 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LtbrP50284 Gm11105-201ENSMUST00000112781 478 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm7146-201ENSMUST00000116079 739 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
LtbrP50284 Gm14794-201ENSMUST00000118181 192 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm14229-201ENSMUST00000121178 850 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm13593-201ENSMUST00000121329 692 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC8.95□□□□□ -0.98
LtbrP50284 Gm371-201ENSMUST00000142240 1245 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC8.95□□□□□ -0.98
LtbrP50284 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LtbrP50284 Gm25342-201ENSMUST00000157459 122 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm23028-201ENSMUST00000158773 265 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm21772-201ENSMUST00000169213 478 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm17126-201ENSMUST00000172276 523 ntBASIC8.95□□□□□ -0.98
LtbrP50284 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LtbrP50284 Mir496b-201ENSMUST00000184935 113 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm28871-201ENSMUST00000186191 687 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm18448-201ENSMUST00000186286 599 ntBASIC8.95□□□□□ -0.98
LtbrP50284 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.95□□□□□ -0.98
LtbrP50284 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC8.95□□□□□ -0.98
LtbrP50284 Gm43054-201ENSMUST00000199495 884 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm42760-201ENSMUST00000199814 311 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.95□□□□□ -0.98
LtbrP50284 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
LtbrP50284 AC134334.1-201ENSMUST00000214277 255 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm6581-201ENSMUST00000214545 260 ntBASIC8.95□□□□□ -0.98
LtbrP50284 Gm2099-201ENSMUST00000220979 412 ntBASIC8.95□□□□□ -0.98
LtbrP50284 AC131745.1-201ENSMUST00000223660 330 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms