Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm26072-201ENSMUST00000083135 107 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rfx1P48377 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.14□□□□□ -1.11
Rfx1P48377 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 AC158938.1-201ENSMUST00000225372 6720 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm36963-201ENSMUST00000193506 2324 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Gm11972-201ENSMUST00000118514 389 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Gm11954-201ENSMUST00000121403 349 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.13□□□□□ -1.11
Rfx1P48377 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm43013-201ENSMUST00000198216 247 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Gm3511-201ENSMUST00000199823 204 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm46364-201ENSMUST00000218548 319 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 AC167669.3-201ENSMUST00000224720 393 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rfx1P48377 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm5528-201ENSMUST00000076314 480 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.13□□□□□ -1.11
Rfx1P48377 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rfx1P48377 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rfx1P48377 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 AC114585.1-201ENSMUST00000228080 3680 ntBASIC8.13□□□□□ -1.11
Rfx1P48377 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Rfx1P48377 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm37914-201ENSMUST00000195317 2679 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm13196-201ENSMUST00000118297 379 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm14727-201ENSMUST00000118526 525 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm13988-201ENSMUST00000119363 288 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm14065-201ENSMUST00000120848 585 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm14721-201ENSMUST00000121381 525 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm14990-201ENSMUST00000122354 445 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC8.12□□□□□ -1.11
Rfx1P48377 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC8.12□□□□□ -1.11
Rfx1P48377 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm6061-201ENSMUST00000175860 492 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm4956-202ENSMUST00000178869 672 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm8609-201ENSMUST00000182967 998 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms