Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox6P40645 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox6P40645 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox6P40645 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Sox6P40645 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox6P40645 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox6P40645 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox6P40645 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm14116-201ENSMUST00000117733 805 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm11920-201ENSMUST00000118491 563 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm15750-201ENSMUST00000120970 616 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm24359-201ENSMUST00000158418 221 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm25487-201ENSMUST00000158725 125 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm11107-201ENSMUST00000165414 505 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm18833-201ENSMUST00000173218 862 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm26509-201ENSMUST00000180947 948 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.8□□□□□ -1.48
Sox6P40645 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm8506-201ENSMUST00000186661 829 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm28149-201ENSMUST00000187102 378 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm28768-201ENSMUST00000189034 378 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Gm36991-201ENSMUST00000191800 648 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm37103-201ENSMUST00000191830 115 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm7769-201ENSMUST00000212900 933 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox6P40645 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.8□□□□□ -1.48
Sox6P40645 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Sox6P40645 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Gm6436-201ENSMUST00000077163 451 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.8□□□□□ -1.48
Sox6P40645 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox6P40645 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox6P40645 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.79□□□□□ -1.48
Sox6P40645 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Sox6P40645 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Mir711-201ENSMUST00000102188 82 ntBASIC5.79□□□□□ -1.48
Sox6P40645 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Gm44361-201ENSMUST00000197960 94 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm17834-201ENSMUST00000204322 891 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.79□□□□□ -1.48
Sox6P40645 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sox6P40645 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.79□□□□□ -1.48
Sox6P40645 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms