Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm28320-201ENSMUST00000187777 2273 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Chd1P40201 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Chd1P40201 AC153955.4-201ENSMUST00000217069 2752 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm11550-201ENSMUST00000118210 699 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm12040-201ENSMUST00000118357 537 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm11318-201ENSMUST00000118640 961 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm13679-201ENSMUST00000118678 484 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm13259-201ENSMUST00000120792 456 ntBASIC9.2□□□□□ -0.94
Chd1P40201 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm43768-201ENSMUST00000198380 1258 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm44316-201ENSMUST00000199274 97 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC9.2□□□□□ -0.94
Chd1P40201 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC9.2□□□□□ -0.94
Chd1P40201 AC131745.1-201ENSMUST00000223660 330 ntBASIC9.2□□□□□ -0.94
Chd1P40201 AC131117.2-203ENSMUST00000225886 950 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd1P40201 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd1P40201 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Gm43162-201ENSMUST00000198292 1770 ntBASIC9.2□□□□□ -0.94
Chd1P40201 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Chd1P40201 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC9.19□□□□□ -0.94
Chd1P40201 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Chd1P40201 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Chd1P40201 Gm42452-201ENSMUST00000199749 617 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Gm43235-201ENSMUST00000200121 297 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Gm43973-201ENSMUST00000203562 210 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Gm8523-201ENSMUST00000211386 552 ntBASIC9.19□□□□□ -0.94
Chd1P40201 AC154417.1-201ENSMUST00000223876 476 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Chd1P40201 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Chd1P40201 Gm24029-201ENSMUST00000083928 143 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Chd1P40201 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Chd1P40201 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Gm42568-201ENSMUST00000195639 1841 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Chd1P40201 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Gm37685-201ENSMUST00000193507 2177 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Gm38697-201ENSMUST00000198061 1746 ntBASIC9.19□□□□□ -0.94
Chd1P40201 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Gm26357-201ENSMUST00000158218 115 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Gm24767-201ENSMUST00000158509 95 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Gm4831-201ENSMUST00000174626 594 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Gm28973-201ENSMUST00000189310 613 ntBASIC9.19□□□□□ -0.94
Chd1P40201 AC116319.2-201ENSMUST00000228159 984 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Chd1P40201 Gm42686-201ENSMUST00000199172 4108 ntBASIC9.19□□□□□ -0.94
Chd1P40201 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chd1P40201 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Chd1P40201 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Chd1P40201 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Gm45548-201ENSMUST00000210076 3167 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Gm6427-201ENSMUST00000118721 979 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Mir6975-201ENSMUST00000184879 61 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Gm8524-201ENSMUST00000186232 379 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC9.18□□□□□ -0.94
Chd1P40201 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC9.18□□□□□ -0.94
Chd1P40201 AC160120.1-201ENSMUST00000227446 663 ntBASIC9.18□□□□□ -0.94
Chd1P40201 AC159006.2-201ENSMUST00000228734 4144 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Gm42503-201ENSMUST00000199080 3706 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC9.18□□□□□ -0.94
Chd1P40201 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Chd1P40201 AC114585.1-201ENSMUST00000228080 3680 ntBASIC9.18□□□□□ -0.94
Chd1P40201 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chd1P40201 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Chd1P40201 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Gm43981-201ENSMUST00000203285 1467 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Gm19093-201ENSMUST00000210671 1454 ntBASIC9.17□□□□□ -0.94
Chd1P40201 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chd1P40201 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC9.17□□□□□ -0.94
Chd1P40201 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Chd1P40201 Gm12057-201ENSMUST00000117244 1427 ntBASIC9.17□□□□□ -0.94
Chd1P40201 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms