Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm6990-201ENSMUST00000086830 348 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.24□□□□□ -1.41
Lire1P11260 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.24□□□□□ -1.41
Lire1P11260 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Lire1P11260 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Lire1P11260 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Lire1P11260 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Lire1P11260 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Lire1P11260 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lire1P11260 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.23□□□□□ -1.41
Lire1P11260 Gm13878-201ENSMUST00000117986 577 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm14729-201ENSMUST00000118373 689 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm13702-201ENSMUST00000118542 825 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm6654-201ENSMUST00000118950 348 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm15158-201ENSMUST00000120577 570 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm12094-201ENSMUST00000121781 472 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Gm24756-201ENSMUST00000177002 96 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Gm19206-201ENSMUST00000186401 827 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm412-201ENSMUST00000193360 948 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Gm2860-201ENSMUST00000199226 707 ntBASIC6.23□□□□□ -1.41
Lire1P11260 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.23□□□□□ -1.41
Lire1P11260 AC123944.2-201ENSMUST00000215290 382 ntBASIC6.23□□□□□ -1.41
Lire1P11260 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.23□□□□□ -1.41
Lire1P11260 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.23□□□□□ -1.41
Lire1P11260 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.23□□□□□ -1.41
Lire1P11260 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.23□□□□□ -1.41
Lire1P11260 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.23□□□□□ -1.41
Lire1P11260 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lire1P11260 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lire1P11260 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lire1P11260 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Lire1P11260 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Lire1P11260 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.23□□□□□ -1.41
Lire1P11260 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm22774-201ENSMUST00000102084 109 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm26416-201ENSMUST00000104280 134 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm14116-201ENSMUST00000117733 805 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm15696-201ENSMUST00000121730 445 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm24545-201ENSMUST00000158651 85 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm7289-201ENSMUST00000168993 734 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.22□□□□□ -1.41
Lire1P11260 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm27037-201ENSMUST00000182270 960 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm8245-201ENSMUST00000182434 987 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm37189-201ENSMUST00000192131 298 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm38840-201ENSMUST00000204716 843 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm44943-201ENSMUST00000207254 300 ntBASIC6.22□□□□□ -1.41
Lire1P11260 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm2961-201ENSMUST00000211074 772 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm18620-201ENSMUST00000222295 324 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Lire1P11260 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms