Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm43762-201ENSMUST00000201521 295 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Chmp6P0C0A3 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.71□□□□□ -1.33
Chmp6P0C0A3 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Chmp6P0C0A3 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Chmp6P0C0A3 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Chmp6P0C0A3 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Snora35-201ENSMUST00000104579 128 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm12040-201ENSMUST00000118357 537 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm37177-201ENSMUST00000193768 417 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm37901-201ENSMUST00000195107 514 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm44075-201ENSMUST00000204208 216 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm4548-201ENSMUST00000208487 509 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm45473-201ENSMUST00000211452 616 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm19212-201ENSMUST00000216642 862 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm8290-201ENSMUST00000218202 477 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Chmp6P0C0A3 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm14173-201ENSMUST00000117690 278 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm28918-201ENSMUST00000188822 699 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm5694-201ENSMUST00000195648 641 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm7626-201ENSMUST00000195801 353 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm29778-201ENSMUST00000201667 466 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm7557-201ENSMUST00000221935 865 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Chmp6P0C0A3 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms