Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Retreg1-203ENSMUST00000226438 2783 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm11870-201ENSMUST00000119255 1322 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC6.21□□□□□ -1.41
Hoxd3P09027 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxd3P09027 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxd3P09027 Gm44007-201ENSMUST00000203845 2189 ntBASIC6.21□□□□□ -1.41
Hoxd3P09027 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxd3P09027 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.41
Hoxd3P09027 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxd3P09027 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
Hoxd3P09027 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxd3P09027 Lrrc1-201ENSMUST00000113421 2630 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxd3P09027 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm23529-201ENSMUST00000104562 132 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm12987-201ENSMUST00000118562 489 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm16418-201ENSMUST00000118577 171 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm14159-201ENSMUST00000119832 451 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm15836-201ENSMUST00000119952 793 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm1947-201ENSMUST00000122451 910 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm24994-201ENSMUST00000157414 121 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Mir3060-201ENSMUST00000175339 83 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm23047-201ENSMUST00000177661 94 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm10182-201ENSMUST00000178676 273 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm25944-201ENSMUST00000178758 94 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm26528-201ENSMUST00000181965 283 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm8307-201ENSMUST00000187682 1150 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm29148-201ENSMUST00000188140 336 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm21728-201ENSMUST00000188442 695 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm21923-201ENSMUST00000188455 696 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm21889-201ENSMUST00000188487 695 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm18969-201ENSMUST00000189423 730 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm21920-201ENSMUST00000190042 695 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm21524-201ENSMUST00000190499 696 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm21715-201ENSMUST00000191056 694 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm8407-201ENSMUST00000192719 427 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm36998-201ENSMUST00000193205 704 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm42805-201ENSMUST00000196158 276 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm9354-201ENSMUST00000209075 468 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm45387-201ENSMUST00000209792 632 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm6909-201ENSMUST00000209825 989 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm45549-201ENSMUST00000210180 975 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm18860-201ENSMUST00000212029 764 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm9118-201ENSMUST00000219246 754 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC6.21□□□□□ -1.42
Hoxd3P09027 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Ear14-201ENSMUST00000049559 468 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm7887-201ENSMUST00000056948 537 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm43092-201ENSMUST00000202986 1854 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Hoxd3P09027 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.21□□□□□ -1.42
Hoxd3P09027 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hoxd3P09027 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms