Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm6850-201ENSMUST00000210031 530 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm43981-201ENSMUST00000203285 1467 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm19093-201ENSMUST00000210671 1454 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm38085-201ENSMUST00000195785 3062 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm25415-201ENSMUST00000104220 132 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm12677-201ENSMUST00000118668 426 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm11553-201ENSMUST00000120682 240 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm13593-201ENSMUST00000121329 692 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm12929-201ENSMUST00000122406 370 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm22604-201ENSMUST00000157604 311 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm25550-201ENSMUST00000158079 128 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm25487-201ENSMUST00000158725 125 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm3605-201ENSMUST00000185858 440 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm37838-201ENSMUST00000194464 312 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm43040-201ENSMUST00000202399 558 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm44108-201ENSMUST00000203525 422 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm18040-201ENSMUST00000217922 827 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm8275-201ENSMUST00000219732 424 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 AC167222.2-201ENSMUST00000220014 295 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 AC132260.1-201ENSMUST00000225499 734 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 CT030238.3-201ENSMUST00000227352 875 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm5446-201ENSMUST00000091762 784 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm6166-201ENSMUST00000098689 409 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Hmgb3O54879 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Hmgb3O54879 Gm43128-201ENSMUST00000202212 1621 ntBASIC4.94□□□□□ -1.62
Hmgb3O54879 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
Hmgb3O54879 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC4.93□□□□□ -1.62
Hmgb3O54879 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Hmgb3O54879 Snord88a-201ENSMUST00000116723 90 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm15901-201ENSMUST00000117663 941 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm14728-201ENSMUST00000122196 492 ntBASIC4.93□□□□□ -1.62
Hmgb3O54879 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms