Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm27210-201ENSMUST00000184263 402 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm31861-201ENSMUST00000204563 672 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm46223-201ENSMUST00000215196 675 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm16335-201ENSMUST00000077495 309 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm23502-201ENSMUST00000083902 145 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm7927-201ENSMUST00000118818 880 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm11990-201ENSMUST00000121505 897 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm25782-201ENSMUST00000122526 289 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm25013-201ENSMUST00000158402 128 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm23408-201ENSMUST00000158523 265 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm24735-201ENSMUST00000158859 118 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm15970-201ENSMUST00000160623 834 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Mir5125-201ENSMUST00000175240 79 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Mir7211-201ENSMUST00000184071 63 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm38291-201ENSMUST00000193671 259 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm5990-201ENSMUST00000203126 746 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm44225-201ENSMUST00000203582 186 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm43946-201ENSMUST00000204058 886 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm44571-201ENSMUST00000208092 533 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm45850-201ENSMUST00000212536 338 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.38□□□□□ -1.39
Scn1aA2APX8 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Scn1aA2APX8 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm14938-201ENSMUST00000119482 943 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm16423-201ENSMUST00000120078 947 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm13493-201ENSMUST00000120318 493 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm25342-201ENSMUST00000157459 122 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm29551-201ENSMUST00000190913 698 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm37358-201ENSMUST00000195492 479 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm43779-201ENSMUST00000196691 829 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm24029-201ENSMUST00000083928 143 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Scn1aA2APX8 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms