Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CtcflA2APF3 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CtcflA2APF3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
CtcflA2APF3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CtcflA2APF3 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CtcflA2APF3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CtcflA2APF3 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.65□□□□□ -1.51
CtcflA2APF3 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.64□□□□□ -1.51
CtcflA2APF3 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CtcflA2APF3 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CtcflA2APF3 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CtcflA2APF3 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CtcflA2APF3 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm24519-201ENSMUST00000104507 132 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm14382-201ENSMUST00000117374 437 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm15310-201ENSMUST00000117891 372 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm12040-201ENSMUST00000118357 537 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Zfp389-201ENSMUST00000118425 675 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm14769-201ENSMUST00000118590 432 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm13444-201ENSMUST00000119445 522 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC5.64□□□□□ -1.51
CtcflA2APF3 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CtcflA2APF3 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CtcflA2APF3 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm26025-201ENSMUST00000158655 271 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm20690-201ENSMUST00000177341 315 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm20615-201ENSMUST00000177503 705 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CtcflA2APF3 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm27178-201ENSMUST00000184962 340 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28929-201ENSMUST00000185330 1193 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29048-201ENSMUST00000185342 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29403-201ENSMUST00000185491 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28234-201ENSMUST00000185657 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28248-201ENSMUST00000186093 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29633-202ENSMUST00000186217 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28829-201ENSMUST00000186231 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28261-201ENSMUST00000186417 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28815-201ENSMUST00000186751 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28608-201ENSMUST00000186860 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28122-201ENSMUST00000187088 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28420-201ENSMUST00000187340 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28106-201ENSMUST00000187640 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28698-201ENSMUST00000187734 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29224-201ENSMUST00000187965 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29189-201ENSMUST00000188018 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29476-201ENSMUST00000188397 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29505-201ENSMUST00000188424 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28125-201ENSMUST00000188470 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29391-201ENSMUST00000188545 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29280-201ENSMUST00000188571 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28349-201ENSMUST00000188590 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29652-201ENSMUST00000188622 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28819-206ENSMUST00000188816 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29079-201ENSMUST00000188875 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28213-201ENSMUST00000189183 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29382-201ENSMUST00000189549 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29377-205ENSMUST00000189603 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28327-201ENSMUST00000189638 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28790-201ENSMUST00000189642 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28907-201ENSMUST00000189700 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29586-207ENSMUST00000189745 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29115-201ENSMUST00000189870 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28366-201ENSMUST00000190147 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29212-201ENSMUST00000190384 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29533-201ENSMUST00000190403 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28162-201ENSMUST00000190545 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29030-201ENSMUST00000190848 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28742-201ENSMUST00000191001 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28899-201ENSMUST00000191161 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29567-201ENSMUST00000191188 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28222-201ENSMUST00000191210 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28776-201ENSMUST00000191282 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29306-201ENSMUST00000191366 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29618-201ENSMUST00000191423 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28136-210ENSMUST00000191432 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm29251-201ENSMUST00000191480 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm28658-201ENSMUST00000191532 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm36991-201ENSMUST00000191800 648 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm32180-201ENSMUST00000192415 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm30598-201ENSMUST00000192620 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm37627-201ENSMUST00000194585 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm37871-201ENSMUST00000194973 688 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm34274-201ENSMUST00000195825 615 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm22711-202ENSMUST00000197029 135 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm42782-201ENSMUST00000197286 522 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm43396-201ENSMUST00000197506 706 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm43033-201ENSMUST00000199682 425 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm9357-201ENSMUST00000207138 805 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm45343-201ENSMUST00000210452 828 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC5.64□□□□□ -1.51
CtcflA2APF3 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.64□□□□□ -1.51
CtcflA2APF3 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.64□□□□□ -1.51
CtcflA2APF3 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms