Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Mup-ps4-201ENSMUST00000151005 539 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Spanxn4-201ENSMUST00000172433 424 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm21171-201ENSMUST00000180048 673 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm7734-201ENSMUST00000182832 1011 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm28803-201ENSMUST00000190385 764 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm18971-201ENSMUST00000197240 374 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm5857-201ENSMUST00000198953 493 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm44989-201ENSMUST00000204749 217 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm44982-201ENSMUST00000208795 471 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm45343-201ENSMUST00000210452 828 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm8623-201ENSMUST00000071573 436 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Trim42Q9D2H5 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 AC160028.2-201ENSMUST00000218937 2519 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm25943-201ENSMUST00000103791 90 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Mir466b-7-201ENSMUST00000103804 88 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Mir466b-5-201ENSMUST00000103900 88 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm12814-201ENSMUST00000117091 846 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm15001-201ENSMUST00000117657 795 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm11865-201ENSMUST00000118093 859 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm22224-201ENSMUST00000157357 93 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Mir466b-4-201ENSMUST00000178801 90 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm25285-201ENSMUST00000178951 90 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Mir466b-6-201ENSMUST00000180061 90 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Mir466c-2-201ENSMUST00000180211 90 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Mir6403-201ENSMUST00000185007 129 ntBASIC7.29□□□□□ -1.24
Trim42Q9D2H5 Gm27782-201ENSMUST00000185059 199 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms