Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm10794-201ENSMUST00000099624 207 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm12073-201ENSMUST00000117382 524 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm4992-201ENSMUST00000120256 768 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm12229-201ENSMUST00000120487 468 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm5166-201ENSMUST00000121332 573 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm15501-202ENSMUST00000140687 625 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm22820-201ENSMUST00000157205 329 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm9274-201ENSMUST00000182505 984 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm29160-201ENSMUST00000190094 699 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm18838-201ENSMUST00000204855 886 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm46311-201ENSMUST00000217971 203 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm5341-201ENSMUST00000058881 489 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm28392-201ENSMUST00000077630 393 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Gm42479-201ENSMUST00000198654 1356 ntBASIC6.95□□□□□ -1.3
Ddx56Q9D0R4 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm24869-201ENSMUST00000104072 128 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm6987-201ENSMUST00000119319 428 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms