Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm7113-201ENSMUST00000120477 958 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm23896-201ENSMUST00000158109 130 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm17137-202ENSMUST00000165729 957 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm43116-201ENSMUST00000199789 195 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm5027-201ENSMUST00000206700 375 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm45733-201ENSMUST00000212988 437 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm28392-201ENSMUST00000077630 393 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 AC154368.2-201ENSMUST00000222334 1724 ntBASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm11821-201ENSMUST00000117335 979 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm12447-201ENSMUST00000119110 470 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm14587-201ENSMUST00000121714 658 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm14613-201ENSMUST00000122239 752 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm15300-201ENSMUST00000122324 279 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm6081-201ENSMUST00000134472 489 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm25219-201ENSMUST00000157545 330 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm16112-201ENSMUST00000159075 382 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm29650-201ENSMUST00000188485 742 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm43233-201ENSMUST00000200491 616 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm45122-201ENSMUST00000206376 784 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm5341-201ENSMUST00000058881 489 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm10826-201ENSMUST00000215366 3304 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.03□□□□□ -1.28
Smc1aQ9CU62 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Smc1aQ9CU62 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Smc1aQ9CU62 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms