Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Rpa3Q9CQ71 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm13183-201ENSMUST00000118615 789 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm5125-201ENSMUST00000148614 624 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm26046-201ENSMUST00000157312 166 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm27348-201ENSMUST00000184511 170 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm8860-201ENSMUST00000193160 445 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
Rpa3Q9CQ71 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm13702-201ENSMUST00000118542 825 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm16269-201ENSMUST00000160532 409 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm6541-201ENSMUST00000165542 561 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm29111-201ENSMUST00000188823 696 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm28584-201ENSMUST00000191489 696 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm37265-201ENSMUST00000191698 885 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm38138-201ENSMUST00000193274 696 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm37991-201ENSMUST00000194297 696 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm37809-201ENSMUST00000195050 931 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm18290-201ENSMUST00000202900 844 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Gm4548-201ENSMUST00000208487 509 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.49□□□□□ -1.37
Rpa3Q9CQ71 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms