Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm22690-201ENSMUST00000175054 110 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm21241-201ENSMUST00000179551 934 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm29369-201ENSMUST00000190674 615 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm6197-201ENSMUST00000192273 454 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm18445-201ENSMUST00000195502 774 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm43035-201ENSMUST00000197626 517 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm43198-201ENSMUST00000200927 326 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm7946-201ENSMUST00000203326 958 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm6885-201ENSMUST00000217261 372 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm18503-201ENSMUST00000220340 728 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Trim11Q99PQ2 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm3675-201ENSMUST00000175904 1653 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm22707-201ENSMUST00000103834 110 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm11926-201ENSMUST00000118520 430 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm13930-201ENSMUST00000118569 368 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm14869-201ENSMUST00000119007 884 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm13720-201ENSMUST00000120741 196 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm14796-201ENSMUST00000121216 959 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm14903-201ENSMUST00000122435 537 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm24286-201ENSMUST00000157632 128 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm17212-201ENSMUST00000166666 259 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm20462-201ENSMUST00000172623 408 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm26092-201ENSMUST00000179798 97 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Mir669a-1-201ENSMUST00000180238 97 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm27684-201ENSMUST00000183778 80 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm44111-201ENSMUST00000204649 399 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm44277-201ENSMUST00000205128 649 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm44565-201ENSMUST00000208194 269 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm45319-201ENSMUST00000210220 318 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm18860-201ENSMUST00000212029 764 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 AC115047.1-201ENSMUST00000213795 322 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Gm46424-201ENSMUST00000221567 168 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 AC121947.1-201ENSMUST00000221755 1145 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 AC117814.1-201ENSMUST00000226135 352 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 AC133176.1-201ENSMUST00000226668 219 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim11Q99PQ2 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms