Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm5260-201ENSMUST00000186157 949 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Gm43744-201ENSMUST00000196387 688 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Prpf39Q8K2Z2 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Prpf39Q8K2Z2 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Prpf39Q8K2Z2 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.46□□□□□ -1.37
Prpf39Q8K2Z2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Prpf39Q8K2Z2 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Prpf39Q8K2Z2 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Prpf39Q8K2Z2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Prpf39Q8K2Z2 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm11256-201ENSMUST00000118109 829 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm12713-201ENSMUST00000118404 764 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm9506-201ENSMUST00000118516 320 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm14098-201ENSMUST00000119295 623 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm12438-201ENSMUST00000122034 336 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm13669-201ENSMUST00000122366 457 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm24155-201ENSMUST00000175259 110 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm5947-201ENSMUST00000179156 714 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm5645-201ENSMUST00000179597 714 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm27158-201ENSMUST00000183813 238 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm7492-201ENSMUST00000201745 725 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm22300-201ENSMUST00000082661 126 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Prpf39Q8K2Z2 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Gm22231-201ENSMUST00000101027 73 ntBASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Gm12677-201ENSMUST00000118668 426 ntBASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Gm15596-201ENSMUST00000121139 784 ntBASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Gm12094-201ENSMUST00000121781 472 ntBASIC6.45□□□□□ -1.38
Prpf39Q8K2Z2 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms