Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm24359-201ENSMUST00000158418 221 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm24155-201ENSMUST00000175259 110 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm5283-201ENSMUST00000177874 334 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm18700-201ENSMUST00000185791 553 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm5260-201ENSMUST00000186157 949 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm37265-201ENSMUST00000191698 885 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm18717-201ENSMUST00000192744 1241 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm43772-201ENSMUST00000202052 379 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm5306-201ENSMUST00000203325 757 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm14018-201ENSMUST00000119042 455 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm13818-201ENSMUST00000119441 511 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm12115-201ENSMUST00000119969 447 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm43561-201ENSMUST00000199866 448 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm18618-201ENSMUST00000222211 473 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Brf1Q8CFK2 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm12399-201ENSMUST00000121475 446 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Olfr331-202ENSMUST00000170501 957 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm5947-201ENSMUST00000179156 714 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm5645-201ENSMUST00000179597 714 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm37784-201ENSMUST00000193233 189 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.53□□□□□ -1.2
Brf1Q8CFK2 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms