Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm37435-201ENSMUST00000192078 3947 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm11256-201ENSMUST00000118109 829 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm9005-201ENSMUST00000119908 607 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm23884-201ENSMUST00000122687 294 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm21990-201ENSMUST00000124692 383 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm23259-201ENSMUST00000158318 303 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm22701-201ENSMUST00000175371 291 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm5244-202ENSMUST00000189517 743 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm8860-201ENSMUST00000193160 445 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 AC129219.1-201ENSMUST00000224336 448 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nup88Q8CEC0 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Nup88Q8CEC0 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Nup88Q8CEC0 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.24
Nup88Q8CEC0 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Nup88Q8CEC0 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Nup88Q8CEC0 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Snora35-201ENSMUST00000104579 128 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm14356-201ENSMUST00000118322 869 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm23954-201ENSMUST00000157213 353 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm26346-201ENSMUST00000157525 329 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm9027-201ENSMUST00000165914 661 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm37078-201ENSMUST00000193314 2009 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Gm37342-201ENSMUST00000194588 4965 ntBASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nup88Q8CEC0 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm45633-201ENSMUST00000210669 3253 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm14925-201ENSMUST00000120611 438 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm14054-201ENSMUST00000120744 704 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Mir1960-201ENSMUST00000157488 78 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm26410-201ENSMUST00000157670 261 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm27005-201ENSMUST00000182783 921 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Gm7166-201ENSMUST00000199715 303 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.32□□□□□ -1.24
Nup88Q8CEC0 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms