Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm26923-201ENSMUST00000182615 996 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Mir7220-201ENSMUST00000183978 60 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 AC157822.1-201ENSMUST00000196643 80 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm44742-201ENSMUST00000207190 1412 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 AC166358.5-201ENSMUST00000220706 1302 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 AC139568.1-201ENSMUST00000222878 486 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 AC122393.2-201ENSMUST00000226404 1093 ntBASIC8.67□□□□□ -1.02
Usp40Q8BWR4 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Usp40Q8BWR4 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm12874-201ENSMUST00000117190 913 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm12040-201ENSMUST00000118357 537 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm12998-201ENSMUST00000122445 789 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm23225-201ENSMUST00000158121 114 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm25013-201ENSMUST00000158402 128 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm6541-201ENSMUST00000165542 561 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm38154-201ENSMUST00000195444 340 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm31861-201ENSMUST00000204563 672 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm45850-201ENSMUST00000212536 338 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 AC154484.1-201ENSMUST00000227311 771 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.66□□□□□ -1.02
Usp40Q8BWR4 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm4994-201ENSMUST00000118379 2187 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm37082-201ENSMUST00000192629 1927 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm23485-201ENSMUST00000104181 155 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm22276-201ENSMUST00000122469 129 ntBASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.65□□□□□ -1.02
Usp40Q8BWR4 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms