Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC164625.1-201ENSMUST00000214034 3036 ntBASIC6.08□□□□□ -1.44
Foxc1Q61572 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Foxc1Q61572 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.08□□□□□ -1.44
Foxc1Q61572 Gm13108-201ENSMUST00000122287 1455 ntBASIC6.08□□□□□ -1.44
Foxc1Q61572 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Olfr155-202ENSMUST00000107860 3480 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Foxc1Q61572 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC6.08□□□□□ -1.44
Foxc1Q61572 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Foxc1Q61572 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 AW822252-205ENSMUST00000192662 1352 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm4451-201ENSMUST00000186000 1891 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm42899-201ENSMUST00000197034 2667 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm9246-201ENSMUST00000117587 3490 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 AC160637.1-201ENSMUST00000214037 3887 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm24665-201ENSMUST00000104160 129 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm11408-201ENSMUST00000117889 519 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm12445-201ENSMUST00000117947 885 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm8644-201ENSMUST00000118619 596 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm14835-201ENSMUST00000119039 315 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm13170-201ENSMUST00000119716 643 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm11897-201ENSMUST00000121976 828 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm14847-201ENSMUST00000121978 519 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm26256-201ENSMUST00000122499 186 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm371-201ENSMUST00000142240 1245 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm26086-201ENSMUST00000157902 263 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm6410-201ENSMUST00000181337 1105 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm26528-201ENSMUST00000181965 283 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm27006-201ENSMUST00000182218 943 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm7577-201ENSMUST00000182543 982 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm6074-201ENSMUST00000193340 451 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm37904-201ENSMUST00000195591 312 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm4178-201ENSMUST00000218307 649 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC6.07□□□□□ -1.44
Foxc1Q61572 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 AC166574.2-201ENSMUST00000226751 381 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 AC115878.1-201ENSMUST00000227247 334 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.07□□□□□ -1.44
Foxc1Q61572 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Foxc1Q61572 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms