Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm29848-201ENSMUST00000203107 295 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 CT025630.2-201ENSMUST00000228293 487 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 AC127371.2-201ENSMUST00000228108 1933 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm37022-201ENSMUST00000192517 2254 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm14035-201ENSMUST00000117596 1475 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm10513-201ENSMUST00000194203 6468 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm10744-201ENSMUST00000220184 2706 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm13282-201ENSMUST00000121577 545 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm15618-201ENSMUST00000121610 452 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm26480-201ENSMUST00000122619 297 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm25839-201ENSMUST00000158921 103 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Mir7008-201ENSMUST00000184398 63 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm29141-201ENSMUST00000190357 882 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm29745-201ENSMUST00000198005 687 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Trav3-2-201ENSMUST00000198999 305 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 AC091260.1-201ENSMUST00000216112 229 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm45354-201ENSMUST00000199820 2557 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm44289-201ENSMUST00000204144 1390 ntBASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim41Q5NCC3 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Trim41Q5NCC3 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim41Q5NCC3 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim41Q5NCC3 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim41Q5NCC3 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm15209-201ENSMUST00000117703 400 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm13900-201ENSMUST00000119402 498 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm5406-201ENSMUST00000120054 766 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm23505-201ENSMUST00000158989 130 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm16113-201ENSMUST00000159629 372 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm27539-201ENSMUST00000184971 224 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm27538-201ENSMUST00000185065 294 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm18702-201ENSMUST00000196923 588 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm42594-201ENSMUST00000199511 246 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm44142-201ENSMUST00000203358 311 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 AC166323.1-201ENSMUST00000217756 367 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 AC153975.1-201ENSMUST00000220087 926 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Olfr480-201ENSMUST00000071658 1029 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trim41Q5NCC3 Gm38331-201ENSMUST00000195719 2671 ntBASIC12.77□□□□□ -0.37
Trim41Q5NCC3 AC134917.1-201ENSMUST00000220517 1449 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms