Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm11462-201ENSMUST00000117749 562 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm11617-201ENSMUST00000119609 639 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm23674-201ENSMUST00000157473 131 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm17934-201ENSMUST00000192818 422 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm24032-201ENSMUST00000083932 159 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm24069-201ENSMUST00000104512 127 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm14173-201ENSMUST00000117690 278 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm5793-201ENSMUST00000119393 630 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm13626-201ENSMUST00000119435 402 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm23903-201ENSMUST00000157566 131 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm25374-201ENSMUST00000158158 101 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm22548-201ENSMUST00000174899 78 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm27601-201ENSMUST00000184794 127 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm8869-201ENSMUST00000195222 947 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm36378-201ENSMUST00000201709 388 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm5318-201ENSMUST00000205249 406 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Gm22300-201ENSMUST00000082661 126 ntBASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trafd1Q3UDK1 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Trafd1Q3UDK1 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trafd1Q3UDK1 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trafd1Q3UDK1 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trafd1Q3UDK1 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.15□□□□□ -1.43
Trafd1Q3UDK1 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trafd1Q3UDK1 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms