Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 AC115735.3-201ENSMUST00000227757 513 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 AC166574.7-201ENSMUST00000228502 704 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Mir463-201ENSMUST00000093570 75 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 AC158686.1-201ENSMUST00000218068 2332 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.03□□□□□ -1.44
Col8a1Q00780 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col8a1Q00780 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.03□□□□□ -1.44
Col8a1Q00780 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Col8a1Q00780 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm42700-201ENSMUST00000199071 2437 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm14621-201ENSMUST00000117709 689 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm15310-201ENSMUST00000117891 372 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm12959-201ENSMUST00000119396 403 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm13357-201ENSMUST00000120528 537 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm11553-201ENSMUST00000120682 240 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm11257-201ENSMUST00000121313 315 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm12101-201ENSMUST00000121590 390 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm22795-201ENSMUST00000157233 118 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Mir1932-201ENSMUST00000157390 90 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm20454-201ENSMUST00000172713 221 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm9286-201ENSMUST00000173586 508 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.02□□□□□ -1.45
Col8a1Q00780 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Mir7116-201ENSMUST00000195956 70 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm43560-201ENSMUST00000198100 773 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm4859-201ENSMUST00000199625 787 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm44163-201ENSMUST00000205140 475 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm2221-201ENSMUST00000209342 418 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 AC156832.3-201ENSMUST00000215591 435 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 AC156560.1-201ENSMUST00000221425 256 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms