Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm11371-201ENSMUST00000120294 385 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm13525-201ENSMUST00000120607 478 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm15501-202ENSMUST00000140687 625 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm25653-201ENSMUST00000158473 138 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC8.15□□□□□ -1.1
Rfx1P48377 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm3102-201ENSMUST00000164236 489 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm17064-201ENSMUST00000167690 452 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm24080-201ENSMUST00000175178 232 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Rfx1P48377 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm3841-201ENSMUST00000191399 451 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm18426-201ENSMUST00000191874 973 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm38149-201ENSMUST00000191943 339 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm38281-201ENSMUST00000192301 315 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Trbv9-201ENSMUST00000194494 290 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm17935-201ENSMUST00000196649 772 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm18430-201ENSMUST00000197534 682 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm43979-201ENSMUST00000203179 475 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm8035-201ENSMUST00000204625 687 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC8.15□□□□□ -1.1
Rfx1P48377 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC8.15□□□□□ -1.1
Rfx1P48377 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm3333-202ENSMUST00000221763 1044 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 Mir463-201ENSMUST00000093570 75 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Rfx1P48377 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Rfx1P48377 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.15□□□□□ -1.1
Rfx1P48377 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rfx1P48377 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Rfx1P48377 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.15□□□□□ -1.11
Rfx1P48377 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Rfx1P48377 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Rfx1P48377 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Rfx1P48377 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rfx1P48377 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rfx1P48377 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rfx1P48377 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Rfx1P48377 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC8.14□□□□□ -1.11
Rfx1P48377 AC160029.1-201ENSMUST00000219628 2678 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm23942-201ENSMUST00000101956 107 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Mir760-201ENSMUST00000103257 119 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC8.14□□□□□ -1.11
Rfx1P48377 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm22152-201ENSMUST00000116966 125 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm13414-201ENSMUST00000117516 727 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm15366-201ENSMUST00000118433 1019 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm4914-201ENSMUST00000119757 459 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm14800-201ENSMUST00000122084 1272 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm22206-201ENSMUST00000158612 116 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm23205-201ENSMUST00000158671 103 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.14□□□□□ -1.11
Rfx1P48377 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm26933-201ENSMUST00000182320 827 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm8604-201ENSMUST00000183150 965 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm29141-201ENSMUST00000190357 882 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm28070-201ENSMUST00000191502 445 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm31532-201ENSMUST00000203555 767 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm5305-201ENSMUST00000204010 746 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm44971-201ENSMUST00000206192 337 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm7587-201ENSMUST00000207618 1021 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Rfx1P48377 Gm19137-201ENSMUST00000213790 1164 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 AC156504.1-201ENSMUST00000214608 157 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm19217-201ENSMUST00000218238 328 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Gm7557-201ENSMUST00000221935 865 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Rfx1P48377 Olfr683-201ENSMUST00000061284 960 ntBASIC8.14□□□□□ -1.11
Rfx1P48377 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms