Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdx2P43241 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.98□□□□□ -1.45
Cdx2P43241 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdx2P43241 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm5073-201ENSMUST00000118222 820 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm11833-201ENSMUST00000118393 853 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm13818-201ENSMUST00000119441 511 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm22342-201ENSMUST00000122647 298 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm23250-201ENSMUST00000157444 267 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm22636-201ENSMUST00000158142 275 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm2959-201ENSMUST00000169844 621 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Mir6362-201ENSMUST00000184329 107 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm29160-201ENSMUST00000190094 699 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm37103-201ENSMUST00000191830 115 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.97□□□□□ -1.45
Cdx2P43241 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.97□□□□□ -1.45
Cdx2P43241 LOC665443-201ENSMUST00000212284 796 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm9237-201ENSMUST00000221499 548 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm9788-201ENSMUST00000057038 906 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdx2P43241 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC5.97□□□□□ -1.45
Cdx2P43241 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.97□□□□□ -1.45
Cdx2P43241 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.97□□□□□ -1.45
Cdx2P43241 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx2P43241 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx2P43241 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Cdx2P43241 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.96□□□□□ -1.45
Cdx2P43241 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Cdx2P43241 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.96□□□□□ -1.45
Cdx2P43241 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.96□□□□□ -1.45
Cdx2P43241 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Cdx2P43241 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm14356-201ENSMUST00000118322 869 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm11498-201ENSMUST00000120660 949 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm12181-201ENSMUST00000121448 531 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdx2P43241 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Cdx2P43241 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Mir6992-201ENSMUST00000183342 109 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.96□□□□□ -1.46
Cdx2P43241 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm5990-201ENSMUST00000203126 746 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm5886-202ENSMUST00000203957 522 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms