Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.31□□□□□ -1.4
HttP42859 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.31□□□□□ -1.4
HttP42859 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Mir6400-201ENSMUST00000184870 92 ntBASIC6.31□□□□□ -1.4
HttP42859 Gm17984-201ENSMUST00000205286 859 ntBASIC6.31□□□□□ -1.4
HttP42859 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HttP42859 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HttP42859 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HttP42859 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.3□□□□□ -1.4
HttP42859 Gm12988-201ENSMUST00000119054 478 ntBASIC6.3□□□□□ -1.4
HttP42859 Gm15741-201ENSMUST00000119401 754 ntBASIC6.3□□□□□ -1.4
HttP42859 Gm12267-201ENSMUST00000121609 761 ntBASIC6.3□□□□□ -1.4
HttP42859 Gm10319-202ENSMUST00000159439 846 ntBASIC6.3□□□□□ -1.4
HttP42859 Gm20954-201ENSMUST00000189078 644 ntBASIC6.3□□□□□ -1.4
HttP42859 Gm29778-201ENSMUST00000201667 466 ntBASIC6.3□□□□□ -1.4
HttP42859 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.3□□□□□ -1.4
HttP42859 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HttP42859 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.3□□□□□ -1.4
HttP42859 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.3□□□□□ -1.4
HttP42859 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
HttP42859 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.3□□□□□ -1.4
HttP42859 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.3□□□□□ -1.4
HttP42859 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HttP42859 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HttP42859 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HttP42859 Gm24706-201ENSMUST00000082806 137 ntBASIC6.3□□□□□ -1.4
HttP42859 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.3□□□□□ -1.4
HttP42859 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.3□□□□□ -1.4
HttP42859 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
HttP42859 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HttP42859 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.3□□□□□ -1.4
HttP42859 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Gm14472-201ENSMUST00000119815 282 ntBASIC6.3□□□□□ -1.4
HttP42859 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.3□□□□□ -1.4
HttP42859 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.3□□□□□ -1.4
HttP42859 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HttP42859 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HttP42859 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HttP42859 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
HttP42859 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.29□□□□□ -1.4
HttP42859 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
HttP42859 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Gm43684-201ENSMUST00000199279 6573 ntBASIC6.29□□□□□ -1.4
HttP42859 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
HttP42859 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HttP42859 Gm23031-201ENSMUST00000157998 119 ntBASIC6.29□□□□□ -1.4
HttP42859 Gm33952-201ENSMUST00000197795 408 ntBASIC6.29□□□□□ -1.4
HttP42859 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HttP42859 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
HttP42859 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HttP42859 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
HttP42859 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.29□□□□□ -1.4
HttP42859 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Gm11545-201ENSMUST00000146507 375 ntBASIC6.29□□□□□ -1.4
HttP42859 Gm24692-201ENSMUST00000157761 146 ntBASIC6.29□□□□□ -1.4
HttP42859 Gm29551-201ENSMUST00000190913 698 ntBASIC6.29□□□□□ -1.4
HttP42859 Gm31211-201ENSMUST00000199170 253 ntBASIC6.29□□□□□ -1.4
HttP42859 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.29□□□□□ -1.4
HttP42859 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HttP42859 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.29□□□□□ -1.4
HttP42859 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HttP42859 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.28□□□□□ -1.4
HttP42859 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.28□□□□□ -1.4
HttP42859 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HttP42859 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HttP42859 Gm23879-201ENSMUST00000116874 126 ntBASIC6.28□□□□□ -1.4
HttP42859 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms