Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Gm29385-201ENSMUST00000186831 363 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Gm5050-201ENSMUST00000197164 775 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Gm9237-201ENSMUST00000221499 548 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.67□□□□□ -1.5
Nkx2-2P42586 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx2-2P42586 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm24155-201ENSMUST00000175259 110 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm29111-201ENSMUST00000188823 696 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm29072-201ENSMUST00000191149 678 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm28584-201ENSMUST00000191489 696 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm37784-201ENSMUST00000193233 189 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm38138-201ENSMUST00000193274 696 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm37991-201ENSMUST00000194297 696 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm5694-201ENSMUST00000195648 641 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm43243-201ENSMUST00000199964 278 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm5055-201ENSMUST00000215697 581 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.66□□□□□ -1.5
Nkx2-2P42586 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx2-2P42586 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx2-2P42586 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms