Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC9.23□□□□□ -0.93
Chd1P40201 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC9.23□□□□□ -0.93
Chd1P40201 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC9.23□□□□□ -0.93
Chd1P40201 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Chd1P40201 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC9.23□□□□□ -0.93
Chd1P40201 Gm5554-201ENSMUST00000199726 1206 ntBASIC9.23□□□□□ -0.93
Chd1P40201 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd1P40201 Gm25147-201ENSMUST00000083030 105 ntBASIC9.23□□□□□ -0.93
Chd1P40201 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Chd1P40201 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Chd1P40201 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd1P40201 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.23□□□□□ -0.93
Chd1P40201 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Chd1P40201 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Chd1P40201 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Chd1P40201 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd1P40201 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd1P40201 Gm13193-201ENSMUST00000117275 225 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Gm14746-201ENSMUST00000120309 741 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC9.22□□□□□ -0.93
Chd1P40201 Gm37932-201ENSMUST00000192258 1167 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd1P40201 n-R5s89-201ENSMUST00000083532 104 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Chd1P40201 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Chd1P40201 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Gm15425-201ENSMUST00000119013 2711 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd1P40201 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd1P40201 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd1P40201 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Gm15971-201ENSMUST00000119372 211 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Gm12308-201ENSMUST00000120440 389 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Gm37511-201ENSMUST00000192901 294 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Gm37341-201ENSMUST00000194680 371 ntBASIC9.22□□□□□ -0.93
Chd1P40201 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd1P40201 Gm44952-201ENSMUST00000204443 433 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC9.22□□□□□ -0.93
Chd1P40201 Gm7042-201ENSMUST00000223027 384 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd1P40201 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd1P40201 Gm43857-201ENSMUST00000200343 3079 ntBASIC9.22□□□□□ -0.93
Chd1P40201 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Gm5702-201ENSMUST00000185629 2469 ntBASIC9.21□□□□□ -0.93
Chd1P40201 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.21□□□□□ -0.93
Chd1P40201 Gm37082-201ENSMUST00000192629 1927 ntBASIC9.21□□□□□ -0.93
Chd1P40201 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Chd1P40201 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Chd1P40201 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Chd1P40201 Gm43425-201ENSMUST00000201793 3291 ntBASIC9.21□□□□□ -0.93
Chd1P40201 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd1P40201 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.21□□□□□ -0.94
Chd1P40201 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd1P40201 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Chd1P40201 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd1P40201 Api5-ps-201ENSMUST00000206607 577 ntBASIC9.21□□□□□ -0.94
Chd1P40201 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Chd1P40201 Gm8667-201ENSMUST00000211112 449 ntBASIC9.21□□□□□ -0.94
Chd1P40201 AC154846.2-201ENSMUST00000228805 424 ntBASIC9.21□□□□□ -0.94
Chd1P40201 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Chd1P40201 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd1P40201 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC9.21□□□□□ -0.94
Chd1P40201 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd1P40201 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Chd1P40201 AC135083.2-201ENSMUST00000228599 1456 ntBASIC9.21□□□□□ -0.94
Chd1P40201 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd1P40201 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Chd1P40201 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd1P40201 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd1P40201 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms