Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Traf1P39428 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.35□□□□□ -1.23
Traf1P39428 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Traf1P39428 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Traf1P39428 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.35□□□□□ -1.23
Traf1P39428 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.35□□□□□ -1.23
Traf1P39428 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Traf1P39428 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Traf1P39428 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Traf1P39428 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Traf1P39428 Gm13400-201ENSMUST00000117436 380 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm15901-201ENSMUST00000117663 941 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm6446-201ENSMUST00000120604 818 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm15300-201ENSMUST00000122324 279 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm4660-201ENSMUST00000131499 403 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Gm23896-201ENSMUST00000158109 130 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm17137-202ENSMUST00000165729 957 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm5947-201ENSMUST00000179156 714 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm5645-201ENSMUST00000179597 714 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Gm29509-201ENSMUST00000185716 321 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Gm29385-201ENSMUST00000186831 363 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.34□□□□□ -1.23
Traf1P39428 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Gm28996-201ENSMUST00000190316 721 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Gm37560-201ENSMUST00000194289 1000 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Traf1P39428 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.34□□□□□ -1.23
Traf1P39428 AC129323.1-201ENSMUST00000216733 470 ntBASIC7.34□□□□□ -1.23
Traf1P39428 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.34□□□□□ -1.23
Traf1P39428 AC154481.1-201ENSMUST00000223532 331 ntBASIC7.34□□□□□ -1.23
Traf1P39428 AV026068-216ENSMUST00000223874 328 ntBASIC7.34□□□□□ -1.23
Traf1P39428 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Traf1P39428 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Traf1P39428 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Traf1P39428 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.34□□□□□ -1.23
Traf1P39428 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.24
Traf1P39428 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.34□□□□□ -1.24
Traf1P39428 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
Traf1P39428 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Mir290a-201ENSMUST00000104627 83 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.33□□□□□ -1.24
Traf1P39428 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Gm13626-201ENSMUST00000119435 402 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Gm26238-201ENSMUST00000175538 117 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Ighv1-10-201ENSMUST00000194372 355 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Gm43033-201ENSMUST00000199682 425 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.33□□□□□ -1.24
Traf1P39428 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Traf1P39428 Gm23238-201ENSMUST00000083007 164 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Traf1P39428 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.33□□□□□ -1.24
Traf1P39428 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Traf1P39428 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Traf1P39428 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms