Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LdlrP35951 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.51□□□□□ -1.37
LdlrP35951 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
LdlrP35951 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.51□□□□□ -1.37
LdlrP35951 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Gm25724-201ENSMUST00000104531 117 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm5387-201ENSMUST00000119776 857 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm13462-201ENSMUST00000121472 961 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm12518-201ENSMUST00000122075 779 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm24383-201ENSMUST00000122691 333 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm20689-201ENSMUST00000176033 279 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LdlrP35951 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm8506-201ENSMUST00000186661 829 ntBASIC6.51□□□□□ -1.37
LdlrP35951 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.51□□□□□ -1.37
LdlrP35951 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm37866-201ENSMUST00000191950 696 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm6074-201ENSMUST00000193340 451 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm9931-201ENSMUST00000193584 1185 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm7452-201ENSMUST00000200764 788 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm43992-201ENSMUST00000204358 197 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm2926-201ENSMUST00000205625 239 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm9357-201ENSMUST00000207138 805 ntBASIC6.51□□□□□ -1.37
LdlrP35951 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm17997-201ENSMUST00000211801 840 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm18645-202ENSMUST00000212222 760 ntBASIC6.51□□□□□ -1.37
LdlrP35951 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 AC153516.1-201ENSMUST00000217955 779 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm46191-201ENSMUST00000218899 433 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC6.51□□□□□ -1.37
LdlrP35951 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.51□□□□□ -1.37
LdlrP35951 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC167977.2-201ENSMUST00000225676 682 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LdlrP35951 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LdlrP35951 AW822073-201ENSMUST00000075305 555 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Mir350-201ENSMUST00000083639 99 ntBASIC6.51□□□□□ -1.37
LdlrP35951 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LdlrP35951 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.51□□□□□ -1.37
LdlrP35951 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LdlrP35951 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LdlrP35951 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
LdlrP35951 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Gm22256-201ENSMUST00000102291 107 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Gm23768-201ENSMUST00000104440 131 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Gm24519-201ENSMUST00000104507 132 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.5□□□□□ -1.37
LdlrP35951 Gm24590-201ENSMUST00000116699 119 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Gm22953-201ENSMUST00000116724 101 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Gm22710-201ENSMUST00000116892 125 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Gm14865-201ENSMUST00000117523 494 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Gm12242-201ENSMUST00000118824 738 ntBASIC6.5□□□□□ -1.37
LdlrP35951 Gm12778-201ENSMUST00000122341 333 ntBASIC6.5□□□□□ -1.37
LdlrP35951 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.5□□□□□ -1.37
LdlrP35951 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.5□□□□□ -1.37
LdlrP35951 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LdlrP35951 Gm21392-201ENSMUST00000182950 972 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms