Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm23467-201ENSMUST00000157127 159 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm23903-201ENSMUST00000157566 131 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC6.31□□□□□ -1.4
Hoxc11P31313 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm28803-201ENSMUST00000190385 764 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm6074-201ENSMUST00000193340 451 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm18838-201ENSMUST00000204855 886 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm46364-201ENSMUST00000218548 319 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.31□□□□□ -1.4
Hoxc11P31313 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 AC122924.1-201ENSMUST00000222044 163 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm21731-201ENSMUST00000079524 489 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.31□□□□□ -1.4
Hoxc11P31313 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hoxc11P31313 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hoxc11P31313 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.3□□□□□ -1.4
Hoxc11P31313 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm13265-201ENSMUST00000118090 421 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm15765-201ENSMUST00000118407 910 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm14018-201ENSMUST00000119042 455 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm22600-201ENSMUST00000157598 269 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm25432-201ENSMUST00000158284 66 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Mir6348-201ENSMUST00000183804 120 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.3□□□□□ -1.4
Hoxc11P31313 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm43922-201ENSMUST00000205071 328 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm18618-201ENSMUST00000222211 473 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Hoxc11P31313 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hoxc11P31313 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hoxc11P31313 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.3□□□□□ -1.4
Hoxc11P31313 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hoxc11P31313 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm24069-201ENSMUST00000104512 127 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm11799-201ENSMUST00000116110 460 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm12105-201ENSMUST00000120846 779 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms