Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
BdnfP21237 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
BdnfP21237 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BdnfP21237 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
BdnfP21237 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.31□□□□□ -1.4
BdnfP21237 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.3□□□□□ -1.4
BdnfP21237 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm24519-201ENSMUST00000104507 132 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm14865-201ENSMUST00000117523 494 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm14621-201ENSMUST00000117709 689 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm14729-201ENSMUST00000118373 689 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm14836-201ENSMUST00000118567 471 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm13207-201ENSMUST00000119862 773 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm12229-201ENSMUST00000120487 468 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm15242-201ENSMUST00000122459 283 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm26025-201ENSMUST00000158655 271 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm24735-201ENSMUST00000158859 118 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm18833-201ENSMUST00000173218 862 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BdnfP21237 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm27178-201ENSMUST00000184962 340 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.3□□□□□ -1.4
BdnfP21237 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm7412-201ENSMUST00000191692 605 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm37934-201ENSMUST00000192902 402 ntBASIC6.3□□□□□ -1.4
BdnfP21237 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm43765-201ENSMUST00000196303 893 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm45078-201ENSMUST00000205343 546 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm32899-201ENSMUST00000219694 207 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm18618-201ENSMUST00000222211 473 ntBASIC6.3□□□□□ -1.4
BdnfP21237 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.3□□□□□ -1.4
BdnfP21237 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BdnfP21237 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm22005-201ENSMUST00000082795 141 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
BdnfP21237 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BdnfP21237 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.3□□□□□ -1.4
BdnfP21237 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BdnfP21237 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.3□□□□□ -1.4
BdnfP21237 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC6.3□□□□□ -1.4
BdnfP21237 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BdnfP21237 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
BdnfP21237 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.29□□□□□ -1.4
BdnfP21237 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
BdnfP21237 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BdnfP21237 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.29□□□□□ -1.4
BdnfP21237 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
BdnfP21237 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.29□□□□□ -1.4
BdnfP21237 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.29□□□□□ -1.4
BdnfP21237 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.29□□□□□ -1.4
BdnfP21237 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BdnfP21237 Mir546-201ENSMUST00000102105 121 ntBASIC6.29□□□□□ -1.4
BdnfP21237 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BdnfP21237 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
BdnfP21237 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
BdnfP21237 Gm14070-201ENSMUST00000120773 428 ntBASIC6.29□□□□□ -1.4
BdnfP21237 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BdnfP21237 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms