Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Chmp6P0C0A3 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm26146-201ENSMUST00000104478 185 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm12874-201ENSMUST00000117190 913 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm12262-201ENSMUST00000119915 305 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Mir5107-201ENSMUST00000175586 88 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm26607-201ENSMUST00000180661 867 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm37809-201ENSMUST00000195050 931 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm3544-201ENSMUST00000196129 305 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm2996-201ENSMUST00000211398 537 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm3266-201ENSMUST00000217832 591 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm33312-201ENSMUST00000222443 332 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Chmp6P0C0A3 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm11462-201ENSMUST00000117749 562 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm14356-201ENSMUST00000118322 869 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm11976-201ENSMUST00000119236 295 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm14375-201ENSMUST00000119490 855 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm6081-201ENSMUST00000134472 489 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm26595-201ENSMUST00000181585 484 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm27348-201ENSMUST00000184511 170 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm18700-201ENSMUST00000185791 553 ntBASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.72□□□□□ -1.33
Chmp6P0C0A3 Gm37135-201ENSMUST00000192652 534 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms