Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm24143-201ENSMUST00000082633 145 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm7493-201ENSMUST00000085919 626 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm5402-201ENSMUST00000119588 1618 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm16433-201ENSMUST00000062429 1984 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm44014-201ENSMUST00000205150 1509 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxd3P09027 AC126028.1-201ENSMUST00000226218 2123 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm43609-201ENSMUST00000199084 2712 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 AC138284.3-201ENSMUST00000217345 4663 ntBASIC6.23□□□□□ -1.41
Hoxd3P09027 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.23□□□□□ -1.41
Hoxd3P09027 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxd3P09027 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 AC159379.2-201ENSMUST00000220244 2482 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm36952-201ENSMUST00000194923 3625 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm42907-201ENSMUST00000199793 2148 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm23946-201ENSMUST00000104423 197 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm23653-201ENSMUST00000116751 97 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm13929-201ENSMUST00000117553 1125 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm14519-201ENSMUST00000118490 312 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm9308-201ENSMUST00000119073 448 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm9439-201ENSMUST00000119554 973 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm12123-201ENSMUST00000120348 472 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm9159-201ENSMUST00000120661 566 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm15014-201ENSMUST00000120742 258 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm13788-201ENSMUST00000120767 601 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm11954-201ENSMUST00000121403 349 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm14328-201ENSMUST00000122178 408 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm23583-201ENSMUST00000158533 289 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm24737-201ENSMUST00000158861 100 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm25163-201ENSMUST00000158905 104 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm28058-201ENSMUST00000186421 264 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm43368-201ENSMUST00000200638 409 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm19237-201ENSMUST00000205036 1132 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxd3P09027 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm46146-201ENSMUST00000217483 346 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 AC137950.1-201ENSMUST00000228553 515 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm22810-201ENSMUST00000082741 158 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm5316-202ENSMUST00000185734 3096 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hoxd3P09027 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Hoxd3P09027 AC164437.4-204ENSMUST00000227169 4024 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxd3P09027 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC6.22□□□□□ -1.41
Hoxd3P09027 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms