Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm37238-201ENSMUST00000195552 2390 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm22256-201ENSMUST00000102291 107 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm25564-201ENSMUST00000104604 132 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm12727-201ENSMUST00000119885 359 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Hmgb3O54879 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm24545-201ENSMUST00000158651 85 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm26607-201ENSMUST00000180661 867 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm27866-201ENSMUST00000184459 171 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm32158-201ENSMUST00000200135 404 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm5324-201ENSMUST00000208115 476 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 AC153847.1-201ENSMUST00000214524 353 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 AC155270.1-202ENSMUST00000221503 352 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm6575-201ENSMUST00000222946 697 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 AC157212.1-201ENSMUST00000228398 1075 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm4953-201ENSMUST00000077309 483 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm38200-201ENSMUST00000192083 2111 ntBASIC4.96□□□□□ -1.62
Hmgb3O54879 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hmgb3O54879 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hmgb3O54879 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm44209-201ENSMUST00000204556 4153 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm37137-201ENSMUST00000195138 2684 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm42507-201ENSMUST00000201187 2555 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Serpina3h-202ENSMUST00000116393 1226 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm14201-201ENSMUST00000117627 289 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm14733-201ENSMUST00000117680 133 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm13463-201ENSMUST00000119020 233 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm12499-201ENSMUST00000121961 546 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm4887-201ENSMUST00000122230 1053 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm25395-201ENSMUST00000157343 272 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm22990-201ENSMUST00000175427 89 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Mir6362-201ENSMUST00000184329 107 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm29385-201ENSMUST00000186831 363 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm9114-201ENSMUST00000188558 997 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm42443-201ENSMUST00000198084 1155 ntBASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC4.95□□□□□ -1.62
Hmgb3O54879 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms