Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm18716-201ENSMUST00000204507 1603 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm24473-201ENSMUST00000104483 131 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm15366-201ENSMUST00000118433 1019 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm12135-201ENSMUST00000119170 466 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm6446-201ENSMUST00000120604 818 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm13121-201ENSMUST00000120637 632 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm11581-201ENSMUST00000122024 763 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm25179-201ENSMUST00000122632 128 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm25713-201ENSMUST00000158625 109 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm4956-202ENSMUST00000178869 672 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm35323-201ENSMUST00000191836 499 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm42976-201ENSMUST00000200313 222 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm7463-201ENSMUST00000201541 547 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm8930-201ENSMUST00000201693 768 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 AC147101.1-201ENSMUST00000217964 312 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 AC132384.13-201ENSMUST00000219556 1159 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 AC140930.1-201ENSMUST00000221889 389 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 AV026068-216ENSMUST00000223874 328 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 AV026068-218ENSMUST00000223980 575 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 AC117656.3-204ENSMUST00000225656 859 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 Gm42671-201ENSMUST00000198013 1604 ntBASIC8.25□□□□□ -1.09
NpcdF8VQB8 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NpcdF8VQB8 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
NpcdF8VQB8 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm26377-201ENSMUST00000102184 108 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm12287-201ENSMUST00000119770 707 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Mup-ps13-201ENSMUST00000120662 545 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Mup-ps1-201ENSMUST00000120720 544 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm25413-201ENSMUST00000158544 312 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm26211-201ENSMUST00000158578 129 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm16026-202ENSMUST00000159695 772 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm17366-201ENSMUST00000167629 187 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Mir3078-201ENSMUST00000175231 87 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm8498-201ENSMUST00000188227 974 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm37349-201ENSMUST00000194205 624 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm43392-201ENSMUST00000196560 434 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm43093-201ENSMUST00000202439 1213 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm44088-201ENSMUST00000204595 237 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NpcdF8VQB8 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC8.24□□□□□ -1.09
NpcdF8VQB8 AC122290.1-201ENSMUST00000225631 1078 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 AC167192.1-201ENSMUST00000225908 139 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 AC158750.1-201ENSMUST00000226163 634 ntBASIC8.24□□□□□ -1.09
NpcdF8VQB8 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms