Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm12985-201ENSMUST00000118376 183 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm13679-201ENSMUST00000118678 484 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm12369-201ENSMUST00000121343 942 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm12451-201ENSMUST00000121636 633 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm13669-201ENSMUST00000122366 457 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm4152-201ENSMUST00000172675 259 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm29650-201ENSMUST00000188485 742 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm8454-201ENSMUST00000196980 811 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm46364-201ENSMUST00000218548 319 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm7413-201ENSMUST00000219498 462 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm6562-201ENSMUST00000221903 464 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Trim3Q9R1R2 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm11920-201ENSMUST00000118491 563 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm5387-201ENSMUST00000119776 857 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm15181-201ENSMUST00000120142 177 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm2986-201ENSMUST00000121603 382 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm44361-201ENSMUST00000197960 94 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm6436-201ENSMUST00000077163 451 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm10205-201ENSMUST00000087431 234 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms