Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Snora35-201ENSMUST00000104579 128 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm14755-201ENSMUST00000118037 384 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm12937-201ENSMUST00000118333 448 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm11902-201ENSMUST00000118849 270 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm7058-201ENSMUST00000119209 902 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Mir1903-201ENSMUST00000122574 80 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm23884-201ENSMUST00000122687 294 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm4660-201ENSMUST00000131499 403 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm25487-201ENSMUST00000158725 125 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm23343-201ENSMUST00000158964 143 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm20620-201ENSMUST00000177528 168 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm43436-201ENSMUST00000199308 147 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm43233-201ENSMUST00000200491 616 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm44091-201ENSMUST00000205212 649 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm45485-201ENSMUST00000211229 357 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm5055-201ENSMUST00000215697 581 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm18628-201ENSMUST00000220584 475 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.85□□□□□ -1.47
Cdc40Q9DC48 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm25346-201ENSMUST00000104509 128 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm22710-201ENSMUST00000116892 125 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm13835-201ENSMUST00000118459 685 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Mir1960-201ENSMUST00000157488 78 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm26410-201ENSMUST00000157670 261 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm25387-201ENSMUST00000157813 132 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm23894-201ENSMUST00000158107 313 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm26037-201ENSMUST00000158150 311 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm23259-201ENSMUST00000158318 303 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm20549-201ENSMUST00000174804 429 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm27005-201ENSMUST00000182783 921 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Mir6367-201ENSMUST00000183385 102 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Mir6911-201ENSMUST00000184241 69 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm28918-201ENSMUST00000188822 699 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm43354-201ENSMUST00000196862 346 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm44361-201ENSMUST00000197960 94 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm29778-201ENSMUST00000201667 466 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm45246-201ENSMUST00000210820 367 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdc40Q9DC48 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms