Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ddx56Q9D0R4 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm11198-201ENSMUST00000119771 974 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm15019-201ENSMUST00000120148 434 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm11796-201ENSMUST00000120208 972 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm15349-201ENSMUST00000121154 204 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm4997-201ENSMUST00000154056 360 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm26321-201ENSMUST00000157740 242 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm19280-201ENSMUST00000190191 205 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm28620-201ENSMUST00000190463 439 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm38268-201ENSMUST00000195813 193 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm42454-201ENSMUST00000196805 1181 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm44403-201ENSMUST00000198554 129 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm4602-201ENSMUST00000203198 308 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm44147-201ENSMUST00000204658 94 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm8748-201ENSMUST00000211125 587 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm9985-201ENSMUST00000044101 510 ntBASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ddx56Q9D0R4 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.96□□□□□ -1.29
Ddx56Q9D0R4 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm14786-201ENSMUST00000117127 944 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm15621-201ENSMUST00000119162 364 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm11553-201ENSMUST00000120682 240 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm23587-201ENSMUST00000157658 84 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm8715-201ENSMUST00000162728 531 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm26381-201ENSMUST00000174895 92 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm22990-201ENSMUST00000175427 89 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Mir6348-201ENSMUST00000183804 120 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm18290-201ENSMUST00000202900 844 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm3549-201ENSMUST00000203873 794 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm18012-201ENSMUST00000204558 773 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm6681-201ENSMUST00000205215 607 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.96□□□□□ -1.3
Ddx56Q9D0R4 Gm2754-201ENSMUST00000223383 589 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms