Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37056-201ENSMUST00000192141 1865 ntBASIC7.07□□□□□ -1.28
Smc1aQ9CU62 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Smc1aQ9CU62 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm11799-201ENSMUST00000116110 460 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm8534-201ENSMUST00000118553 766 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm43383-201ENSMUST00000195981 469 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm7492-201ENSMUST00000201745 725 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm7554-201ENSMUST00000202282 574 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm18600-201ENSMUST00000207205 505 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm5324-201ENSMUST00000208115 476 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm5055-201ENSMUST00000215697 581 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Gm26442-201ENSMUST00000082588 153 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Smc1aQ9CU62 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm14513-201ENSMUST00000117403 123 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm11256-201ENSMUST00000118109 829 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm13222-201ENSMUST00000119638 138 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm9005-201ENSMUST00000119908 607 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm6977-201ENSMUST00000121568 512 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm3810-201ENSMUST00000122413 476 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm25387-201ENSMUST00000157813 132 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm26211-201ENSMUST00000158578 129 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm6726-201ENSMUST00000172786 681 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm20620-201ENSMUST00000177528 168 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm26557-201ENSMUST00000180756 493 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm26595-201ENSMUST00000181585 484 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm7266-201ENSMUST00000187999 405 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm28918-201ENSMUST00000188822 699 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm7166-201ENSMUST00000199715 303 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm35619-201ENSMUST00000222548 600 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 AC113269.1-201ENSMUST00000227185 674 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Smc1aQ9CU62 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Smc1aQ9CU62 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms