Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm22256-201ENSMUST00000102291 107 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm8534-201ENSMUST00000118553 766 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm12189-201ENSMUST00000119779 912 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm16330-201ENSMUST00000128324 297 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm15534-201ENSMUST00000137642 562 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm23317-201ENSMUST00000157999 129 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20690-201ENSMUST00000177341 315 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm21728-201ENSMUST00000188442 695 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm21889-201ENSMUST00000188487 695 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20932-201ENSMUST00000189115 694 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm28665-201ENSMUST00000189269 670 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm21920-201ENSMUST00000190042 695 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm29141-201ENSMUST00000190357 882 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm43245-201ENSMUST00000197603 468 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm43089-201ENSMUST00000199162 275 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm43004-201ENSMUST00000201872 703 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm44252-201ENSMUST00000204187 330 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm45279-201ENSMUST00000210315 391 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm7368-201ENSMUST00000213307 367 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 AC111046.1-201ENSMUST00000217715 412 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm2754-201ENSMUST00000223383 589 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm6887-201ENSMUST00000080945 482 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.32□□□□□ -1.4
Clrn1Q8K445 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Clrn1Q8K445 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Clrn1Q8K445 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm25593-201ENSMUST00000102272 96 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm23485-201ENSMUST00000104181 155 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm23748-201ENSMUST00000104227 131 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm15779-201ENSMUST00000117470 412 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm14356-201ENSMUST00000118322 869 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm15007-201ENSMUST00000119982 710 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm16053-201ENSMUST00000120511 188 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm23259-201ENSMUST00000158318 303 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm24363-201ENSMUST00000158440 311 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms