Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm7571-201ENSMUST00000120252 927 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm14840-201ENSMUST00000122135 594 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm26353-201ENSMUST00000158224 255 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm22254-201ENSMUST00000179186 110 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm38237-201ENSMUST00000193366 376 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm38291-201ENSMUST00000193671 259 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm4332-201ENSMUST00000196114 346 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm18290-201ENSMUST00000202900 844 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 AC157572.1-201ENSMUST00000227187 825 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.57□□□□□ -1.2
Brf1Q8CFK2 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm12653-201ENSMUST00000117778 561 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm13690-201ENSMUST00000118989 285 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm14054-201ENSMUST00000120744 704 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm13669-201ENSMUST00000122366 457 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm25962-201ENSMUST00000157173 168 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm22226-201ENSMUST00000157355 109 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm4152-201ENSMUST00000172675 259 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm44374-201ENSMUST00000199821 140 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 BC049739-201ENSMUST00000202626 660 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm45701-201ENSMUST00000212049 235 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.56□□□□□ -1.2
Brf1Q8CFK2 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm14294-201ENSMUST00000119749 751 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm12451-201ENSMUST00000121636 633 ntBASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Brf1Q8CFK2 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms