Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Robo2-210ENSMUST00000226478 8059 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm13835-201ENSMUST00000118459 685 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm24343-201ENSMUST00000158708 111 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm18952-201ENSMUST00000194471 846 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm44809-201ENSMUST00000208305 993 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup88Q8CEC0 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.36□□□□□ -1.23
Nup88Q8CEC0 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm12244-201ENSMUST00000119500 291 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm37376-201ENSMUST00000192176 453 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm19739-201ENSMUST00000195941 153 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm44075-201ENSMUST00000204208 216 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm44091-201ENSMUST00000205212 649 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm45448-201ENSMUST00000211739 209 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Gm5374-202ENSMUST00000222910 314 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup88Q8CEC0 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.35□□□□□ -1.23
Nup88Q8CEC0 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms