Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm14755-201ENSMUST00000118037 384 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm12937-201ENSMUST00000118333 448 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm12094-201ENSMUST00000121781 472 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm23426-201ENSMUST00000122483 318 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm23888-201ENSMUST00000122690 253 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm16330-201ENSMUST00000128324 297 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm6081-201ENSMUST00000134472 489 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm25962-201ENSMUST00000157173 168 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm25550-201ENSMUST00000158079 128 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm17511-201ENSMUST00000172206 342 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm20454-201ENSMUST00000172713 221 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm25675-201ENSMUST00000174979 118 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm22698-201ENSMUST00000175375 108 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Mir5617-201ENSMUST00000176786 57 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm19480-201ENSMUST00000185547 667 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm8190-201ENSMUST00000199603 586 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm44252-201ENSMUST00000204187 330 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm4556-201ENSMUST00000217808 355 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm18628-201ENSMUST00000220584 475 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm6436-201ENSMUST00000077163 451 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Ccdc40Q8BI79 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
Ccdc40Q8BI79 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ccdc40Q8BI79 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm25093-201ENSMUST00000103993 132 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm16073-201ENSMUST00000116032 517 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm22710-201ENSMUST00000116892 125 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm7746-201ENSMUST00000120966 503 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm13440-201ENSMUST00000121665 496 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm23259-201ENSMUST00000158318 303 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm37376-201ENSMUST00000192176 453 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm29778-201ENSMUST00000201667 466 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm46364-201ENSMUST00000218548 319 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Ccdc40Q8BI79 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms