Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm22543-201ENSMUST00000104347 94 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm13400-201ENSMUST00000117436 380 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm13455-201ENSMUST00000118767 517 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm6987-201ENSMUST00000119319 428 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm23884-201ENSMUST00000122687 294 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm22985-201ENSMUST00000122754 116 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm22600-201ENSMUST00000157598 269 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm26486-201ENSMUST00000158021 110 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm26037-201ENSMUST00000158150 311 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm29650-201ENSMUST00000188485 742 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm43491-201ENSMUST00000197133 784 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm44830-201ENSMUST00000207667 584 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 AC159476.2-201ENSMUST00000216221 418 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm18586-201ENSMUST00000217265 518 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 AL589696.1-201ENSMUST00000225711 330 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm24036-201ENSMUST00000082868 156 ntBASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Sp140Q6NSQ5 Gm15394-201ENSMUST00000119656 1308 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm22276-201ENSMUST00000122469 129 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm14368-201ENSMUST00000145305 415 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm25435-201ENSMUST00000158277 267 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm5871-201ENSMUST00000176461 718 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm27005-201ENSMUST00000182783 921 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm27782-201ENSMUST00000185059 199 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm18447-201ENSMUST00000187501 307 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm37511-201ENSMUST00000192901 294 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm44392-201ENSMUST00000196758 115 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sp140Q6NSQ5 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms