Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm9585-201ENSMUST00000219681 1404 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm14158-201ENSMUST00000118409 308 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm14725-201ENSMUST00000120324 828 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm13602-201ENSMUST00000122405 493 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm7613-201ENSMUST00000139070 487 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm28428-201ENSMUST00000188886 697 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm28779-201ENSMUST00000189678 323 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm38149-201ENSMUST00000191943 339 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm8101-201ENSMUST00000192796 478 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm18009-201ENSMUST00000203239 1016 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm44050-201ENSMUST00000204263 527 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 AC159619.2-201ENSMUST00000222924 401 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 AC107757.1-201ENSMUST00000226780 357 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm38315-201ENSMUST00000194286 2437 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 AC132465.1-201ENSMUST00000219938 1307 ntBASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim41Q5NCC3 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm14331-201ENSMUST00000120396 409 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm11910-201ENSMUST00000121624 432 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm14990-201ENSMUST00000122354 445 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm20401-201ENSMUST00000173717 212 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm26993-201ENSMUST00000182766 789 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm5261-201ENSMUST00000185860 713 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm44449-201ENSMUST00000203610 153 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm18562-201ENSMUST00000209949 915 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 AC155270.1-202ENSMUST00000221503 352 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 AC135086.1-201ENSMUST00000228621 817 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 AC165155.1-201ENSMUST00000228932 445 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Dalir-201ENSMUST00000188773 2170 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Gm42972-201ENSMUST00000196937 5617 ntBASIC12.8□□□□□ -0.36
Trim41Q5NCC3 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm8662-201ENSMUST00000118644 574 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm11796-201ENSMUST00000120208 972 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm24734-201ENSMUST00000158860 262 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm26607-201ENSMUST00000180661 867 ntBASIC12.79□□□□□ -0.36
Trim41Q5NCC3 Gm38068-201ENSMUST00000192546 540 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms