Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm22374-201ENSMUST00000104583 132 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm8692-201ENSMUST00000118102 438 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm15181-201ENSMUST00000120142 177 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm7700-201ENSMUST00000120273 970 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm23553-201ENSMUST00000157817 295 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm37177-201ENSMUST00000193768 417 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm44163-201ENSMUST00000205140 475 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.18□□□□□ -1.42
Trafd1Q3UDK1 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm11271-201ENSMUST00000116054 440 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm9506-201ENSMUST00000118516 320 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm4234-201ENSMUST00000119747 714 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm15696-201ENSMUST00000121730 445 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Mir6362-201ENSMUST00000184329 107 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm19087-201ENSMUST00000191430 946 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm412-201ENSMUST00000193360 948 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm37758-201ENSMUST00000194275 629 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm7832-201ENSMUST00000202613 880 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm44075-201ENSMUST00000204208 216 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm45156-201ENSMUST00000207255 439 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm22684-201ENSMUST00000082849 132 ntBASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trafd1Q3UDK1 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.16□□□□□ -1.42
Trafd1Q3UDK1 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms