Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm23550-201ENSMUST00000179003 121 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm25123-201ENSMUST00000179154 121 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm25353-201ENSMUST00000179366 121 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm22992-201ENSMUST00000179496 121 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm25892-201ENSMUST00000179867 121 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm24092-201ENSMUST00000180257 121 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm27299-201ENSMUST00000184593 103 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm43561-201ENSMUST00000199866 448 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm43459-201ENSMUST00000202093 331 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm18040-201ENSMUST00000217922 827 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim43aQ3TL54 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Trim43aQ3TL54 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim43aQ3TL54 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim43aQ3TL54 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Trim43aQ3TL54 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.36
Trim43aQ3TL54 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.59□□□□□ -1.36
Trim43aQ3TL54 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm26146-201ENSMUST00000104478 185 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm12540-201ENSMUST00000121938 319 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm23756-201ENSMUST00000157582 114 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm10136-201ENSMUST00000183196 435 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm27193-201ENSMUST00000184217 586 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm2229-201ENSMUST00000193328 710 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm37838-201ENSMUST00000194464 312 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm43849-201ENSMUST00000201086 215 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm36378-201ENSMUST00000201709 388 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm7832-201ENSMUST00000202613 880 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm44837-201ENSMUST00000206863 717 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm18940-201ENSMUST00000222518 871 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.58□□□□□ -1.36
Trim43aQ3TL54 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Rnu11-201ENSMUST00000104135 134 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm15016-201ENSMUST00000117300 720 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm13455-201ENSMUST00000118767 517 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm12504-202ENSMUST00000148026 306 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm16102-201ENSMUST00000160955 420 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm27186-201ENSMUST00000184223 307 ntBASIC6.57□□□□□ -1.36
Trim43aQ3TL54 Gm28023-201ENSMUST00000184556 60 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms