Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm10780-201ENSMUST00000099459 285 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Usp39Q3TIX9 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm13265-201ENSMUST00000118090 421 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm14870-201ENSMUST00000118414 156 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm14070-201ENSMUST00000120773 428 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm15057-201ENSMUST00000121516 534 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm26023-201ENSMUST00000122722 313 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm24781-201ENSMUST00000157636 117 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm24812-201ENSMUST00000175315 284 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm42708-201ENSMUST00000196332 905 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm43141-201ENSMUST00000199695 274 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm17918-201ENSMUST00000205315 574 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm46203-201ENSMUST00000218130 478 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 CT010505.1-201ENSMUST00000227026 396 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm24036-201ENSMUST00000082868 156 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp39Q3TIX9 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp39Q3TIX9 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp39Q3TIX9 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp39Q3TIX9 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp39Q3TIX9 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Usp39Q3TIX9 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp39Q3TIX9 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms