Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm25631-201ENSMUST00000104390 130 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm8624-201ENSMUST00000118083 432 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm14938-201ENSMUST00000119482 943 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm14776-201ENSMUST00000121029 887 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm13462-201ENSMUST00000121472 961 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm10157-201ENSMUST00000139408 343 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Snora81-201ENSMUST00000157310 178 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm17152-201ENSMUST00000172430 535 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm4308-201ENSMUST00000179735 914 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm29492-201ENSMUST00000187124 457 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm20239-201ENSMUST00000196610 982 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm44979-201ENSMUST00000206218 287 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm46203-201ENSMUST00000218130 478 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm3678-201ENSMUST00000218888 492 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm4796-201ENSMUST00000219802 624 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 AC167013.2-202ENSMUST00000227035 333 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmgb1P63158 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm37488-201ENSMUST00000195434 3374 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm7680-201ENSMUST00000216198 1348 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Mir678-201ENSMUST00000102114 84 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm24519-201ENSMUST00000104507 132 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm11903-201ENSMUST00000118958 727 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm11498-201ENSMUST00000120660 949 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm15618-201ENSMUST00000121610 452 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm28580-201ENSMUST00000186767 88 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC7.37□□□□□ -1.23
Hmgb1P63158 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm29475-201ENSMUST00000190767 312 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm5575-201ENSMUST00000190879 398 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm17895-201ENSMUST00000194028 874 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm31532-201ENSMUST00000203555 767 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm45710-201ENSMUST00000212847 215 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Hmgb1P63158 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm23238-201ENSMUST00000083007 164 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Gm6166-201ENSMUST00000098689 409 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmgb1P63158 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.37□□□□□ -1.23
Hmgb1P63158 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.37□□□□□ -1.23
Hmgb1P63158 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms